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Difference between revisions of "STEM"
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== '''STEM Community Phone Call''' == | == '''STEM Community Phone Call''' == | ||
− | The STEM community runs a [[Join the STEM Community|monthly phone call]] anyone is free to join. | + | The STEM community runs a [[Join the STEM Community|monthly phone call]] anyone is free to join. The agenda is posted on stem-dev.org every month early in the week of the call for you to view. |
− | The special series of [[Community Ebola Modeling Phone Call]]s | + | The special series of [[Community Ebola Modeling Phone Call]]s held during the epidemic was merged back with our regular [[Join the STEM Community|monthly phone call]]. |
You can still see all the Ebola content [[Join the STEM Community#Ebola Community Efforts|here]] | You can still see all the Ebola content [[Join the STEM Community#Ebola Community Efforts|here]] | ||
== '''STEM Documentation''' == | == '''STEM Documentation''' == | ||
− | The '''Spatio-Temporal Epidemiological Modeler (STEM)''' is a tool designed to help scientists and public health officials create and use models of emerging infectious diseases. STEM uses mathematical models of diseases (based on differential equations) to simulate the development or evolution of a disease in space and time (e.g., avian flu or salmonella). These models could aid in understanding, and potentially preventing, the spread of such diseases. STEM also comes pre-configured with a vast amount of reference or denominator data for the entire world. By using and extending the data and models in STEM it is possible to rapidly prototype and test models for emerging infectious disease. STEM also provides tools to help you compare and validate your models. As an open source project, the ultimate goal of STEM is to support and encourage a community of scientists | + | The '''Spatio-Temporal Epidemiological Modeler (STEM)''' is a tool designed to help scientists and public health officials create and use models of emerging infectious diseases. STEM uses mathematical models of diseases (based on differential equations) to simulate the development or evolution of a disease in space and time (e.g., avian flu or salmonella). These models could aid in understanding, and potentially preventing, the spread of such diseases. STEM also comes pre-configured with a vast amount of reference or denominator data for the entire world. By using and extending the data and models in STEM it is possible to rapidly prototype and test models for emerging infectious disease. STEM also provides tools to help you compare and validate your models. As an open source project, the ultimate goal of STEM is to support and encourage a community of scientists who not only use STEM as a tool but also contribute back to it. STEM is designed so that models and scenarios can be easily shared, extended, and built upon. |
{| style="width: 90%" border="1" cellpadding="5" cellspacing="0" align="center" | {| style="width: 90%" border="1" cellpadding="5" cellspacing="0" align="center" | ||
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| | | | ||
<!-- upper left (INTRODUCTORY RESOURCES GO HERE) --> | <!-- upper left (INTRODUCTORY RESOURCES GO HERE) --> | ||
+ | *[[Installation Guide]] | ||
*[http://www.eclipse.org/stem/ The STEM Website] | *[http://www.eclipse.org/stem/ The STEM Website] | ||
*[[About STEM]] | *[[About STEM]] | ||
*[[Whats New in STEM|What's New in STEM]] | *[[Whats New in STEM|What's New in STEM]] | ||
*STEM Tutorials on YouTube<sup>TM</sup> | *STEM Tutorials on YouTube<sup>TM</sup> | ||
− | #[http://www.youtube.com/watch?v=MtQlS7g7Qnw STEM Model Generator (new!!)] ''requires STEM | + | #[http://www.youtube.com/watch?v=MtQlS7g7Qnw STEM Model Generator (new!!)] ''requires STEM V3.0 milestone'' |
#Full length video [http://www.youtube.com/watch?v=LfiibQX4IFE In English] | #Full length video [http://www.youtube.com/watch?v=LfiibQX4IFE In English] | ||
#Full length video [http://www.youtube.com/watch?v=AFYXvazKkms In Hebrew] | #Full length video [http://www.youtube.com/watch?v=AFYXvazKkms In Hebrew] | ||
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##Only [https://youtu.be/tI0Ogy-8O10 Poultry-Human Transmission] | ##Only [https://youtu.be/tI0Ogy-8O10 Poultry-Human Transmission] | ||
##Including [https://youtu.be/0YJ6FxdhFm8 Human-Human Transmission] | ##Including [https://youtu.be/0YJ6FxdhFm8 Human-Human Transmission] | ||
+ | *Download a step by step guide: [[Media:STEM_HowToGuide.pdf|Ebola Example]] | ||
*[http://www.eclipse.org/stem/talksOnline.php Scientific Talks Online] | *[http://www.eclipse.org/stem/talksOnline.php Scientific Talks Online] | ||
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*'''Running Simulations''' | *'''Running Simulations''' | ||
− | #[[STEM_Map_View|The STEM Map View]] | + | # [[STEM_Map_View|The STEM UI and Map View]] ''(updated)'' |
#[[Batch Mode (Running Experiments)|Running Experiments in Batch Mode]] | #[[Batch Mode (Running Experiments)|Running Experiments in Batch Mode]] | ||
#[[Running an Automated Experiment]] | #[[Running an Automated Experiment]] | ||
− | #[[STEM Headless|Running STEM Headless]] | + | #[[STEM Headless|Running STEM Headless]] ''(STEM on Server)'' |
#[[Importing Data from Files]] | #[[Importing Data from Files]] | ||
#[[STEM Loggers|Simulation Data Logging]] | #[[STEM Loggers|Simulation Data Logging]] | ||
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|- | |- | ||
! style="background: #cceeff;" | | ! style="background: #cceeff;" | | ||
− | === Advanced Guides === | + | === '''Advanced Guides''' === |
− | ! colspan="2" style="background: #cceeff;" | | + | ! colspan="2" style="background: #cceeff;" | |
+ | |||
=== Epidemiological Modeling === | === Epidemiological Modeling === | ||
|- | |- | ||
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*[[Welcome STEM Developers]] | *[[Welcome STEM Developers]] | ||
*[[STEM Eclipse Setup|Setting up a STEM Development Environment]] | *[[STEM Eclipse Setup|Setting up a STEM Development Environment]] | ||
− | *[[STEM Design Document]] | + | *[[STEM Design Document]] ''(updated 4/29/2016)'' |
*[[STEM National Language Support | National Language Support]] | *[[STEM National Language Support | National Language Support]] | ||
*[http://www.eclipse.org/projects/project.php?id=technology.stem Project Stats] | *[http://www.eclipse.org/projects/project.php?id=technology.stem Project Stats] | ||
− | |||
*[[Building the STEM RCP Application|Building the STEM RCP Application]] | *[[Building the STEM RCP Application|Building the STEM RCP Application]] | ||
+ | *[[STEM Create EMF Project|Example: Create a STEM JSON Logger (a new EMF Project)]] | ||
*[[Running STEM from the Development Environment]] | *[[Running STEM from the Development Environment]] | ||
+ | *[[STEM Headless|Running STEM Headless]] ''(STEM on Server)'' | ||
*[[Creating a Customized Color Provider|Customizing Colors]] | *[[Creating a Customized Color Provider|Customizing Colors]] | ||
*[[STEM Performance Tips |General tips when writing performance critical code]] | *[[STEM Performance Tips |General tips when writing performance critical code]] | ||
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=== Release Planning === | === Release Planning === | ||
! colspan="2" style="background: #ffdead;" | | ! colspan="2" style="background: #ffdead;" | | ||
− | === | + | === Important Links === |
|- | |- | ||
| | | | ||
<!-- bottom left (RELEASE PLANNING GOES HERE) --> | <!-- bottom left (RELEASE PLANNING GOES HERE) --> | ||
''Please also see our [http://www.eclipse.org/stem website]'' and [[Whats New in STEM|What's New in STEM]] | ''Please also see our [http://www.eclipse.org/stem website]'' and [[Whats New in STEM|What's New in STEM]] | ||
− | * | + | * V4.0.0 Milestone 1 is now Available |
− | + | * Based on and compatible with Eclipse e4 | |
− | * | + | * STEM V4.0.0M1 supports (J2SE) 8.0 JVM. ''In fact - it's required'' |
− | * | + | |
− | + | ||
− | + | ||
* Release Engineering | * Release Engineering | ||
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<br> | <br> | ||
− | + | * Our [[Disclaimer]]. | |
+ | * [http://www.eclipse.org Main Eclipse Foundation website] | ||
+ | * [http://www.eclipse.org/legal/privacy.php Privacy policy] | ||
+ | * [http://www.eclipse.org/legal/termsofuse.php Website terms of use] | ||
+ | * [http://www.eclipse.org/legal/copyright.php Copyright agent] | ||
+ | * [http://www.eclipse.org/legal Legal] | ||
|- | |- | ||
| colspan="3" align="center" | | | colspan="3" align="center" | |
Revision as of 17:09, 25 January 2019
STEM Community Phone Call
The STEM community runs a monthly phone call anyone is free to join. The agenda is posted on stem-dev.org every month early in the week of the call for you to view. The special series of Community Ebola Modeling Phone Calls held during the epidemic was merged back with our regular monthly phone call. You can still see all the Ebola content here
STEM Documentation
The Spatio-Temporal Epidemiological Modeler (STEM) is a tool designed to help scientists and public health officials create and use models of emerging infectious diseases. STEM uses mathematical models of diseases (based on differential equations) to simulate the development or evolution of a disease in space and time (e.g., avian flu or salmonella). These models could aid in understanding, and potentially preventing, the spread of such diseases. STEM also comes pre-configured with a vast amount of reference or denominator data for the entire world. By using and extending the data and models in STEM it is possible to rapidly prototype and test models for emerging infectious disease. STEM also provides tools to help you compare and validate your models. As an open source project, the ultimate goal of STEM is to support and encourage a community of scientists who not only use STEM as a tool but also contribute back to it. STEM is designed so that models and scenarios can be easily shared, extended, and built upon.