View source for PTP/tutorials/SC12/setup

= Setup for PTP SC12 remote targets for tutorial =

Sample app: shallow 
* from cvs.ncsa.uiuc.edu, repository path: CVS/ptp-samples; open HEAD, open sample, 'Check out as...' on shallow
* note: setup slides say checkout as C project, then convert to Sync.  Alan's GEM slides say check out as C/C++ Sync project directly, which I need to test, never tried this!!! Sounds simpler.
 
Client: use new almost-6.0.3 builds 
* Install NCSA GSI Authentication plugin from           http://forecaster.ncsa.uiuc.edu/updates/juno
For each system we need to document 1. toolchain recommended and/or documented 2. include files - location for setup using UNC notation //connection-name/path/to/include/files 3. resource manager(s) to use 4. what perf tools from the tutorial work there, and 5. anything else we need to know to use system 

===SDSC Trestles===
trestles.sdsc.edu

Update PTP from http://download.eclipse.org/tools/ptp/builds/juno/nightly to get 2 new Trestles target configurations
#toolchain - Linux GCC ( Remote LinuxGCC also builds ok) Remote LinuxGCC puts a bunch of (non-unc) paths in 'Paths and symbols' includes
#include files - 
#**                //trestles/usr/include  --and-- //trestles/opt/openmpi/include
#**    hyperlink nav in editor now works
#Resource manager -
#*Run - edu.sdsc.trestles.torque.batch - new contributed resource manager in the latest PTP builds
#** Other config details: Queue: shared;  Number of nodes: 1:ppn=5;   MPI command: mpirun;    MPI Number of cores: 5
#*Debug - edu.sdsc.trestles.torque.interactive.openmpi - details same as above, using sdm in /home/grw/sdm
#What works here? GEM=yes  LinuxTools=yes
#* TAU installed and functioning. PAPI not available.  To successfully run with TAU from PTP the .bashrc must include these lines "module unload pgi ; module load gnu/4.6.1 openmpi tau"

I am using a shell via MyProxy/GSI Auth in the NCSA plugin (per instructions in ptp-07-ncsa.ppt)

===SDSC Gordon===
gordon.sdsc.edu
# toolchain
# include files
# Resource manager
#* Run -
#* Debug - 
#What works here? GEM? LinuxTools?
#* TAU is installed and works correctly

===VirtualBox torque by Dennis===
[https://www.cct.lsu.edu/~dcastl2/ptp/vbox.php Download and setup info] (Summary: Download VirtualBox, download torque-vm.zip, install VirtualBox and the torque VM, launch it and login with userid ptp and password ptp)
# toolchain - i have tried Linux GCC. builds ok.
# include files - stdio.h is in /usr/include and mpi.h is in /usr/local/include 
# Res Managers
#* Run -  torque-generic-batch, queue: batch; num of nodes: 1; MPI command: mpirun; MPI num of tasks: 5
#* Debug -
#What works here? GEM? LinuxTools?
#* TAU not installed. Local test install had unusual issues.
#Other - OpenMPI 1.4.2 is installed

===supercomputer the roving laptop by Galen===
Temporary IP address , contact Galen for access
# toolchain
# include files - /usr/include   and /usr/include/openmpi-x86_64
# Resource manager - openmpi 
#* Run -  
#* Debug -
#What works here? GEM?  *LinuxTools*
#* TAU installed and functional