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Difference between revisions of "STEM"
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− | == ''' | + | == '''STEM Community Phone Call''' == |
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− | + | The STEM community runs a [[Join the STEM Community|monthly phone call]] anyone is free to join. | |
− | + | The special series of [[Community Ebola Modeling Phone Call]]s has been merged back with our regular [[Join the STEM Community|monthly phone call]]. | |
− | + | You can still see all the Ebola content [[Join the STEM Community#Ebola Community Efforts|here]] | |
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== '''STEM Documentation''' == | == '''STEM Documentation''' == | ||
− | {| border="1" cellpadding="5" cellspacing="0" align="center" | + | The '''Spatio-Temporal Epidemiological Modeler (STEM)''' is a tool designed to help scientists and public health officials create and use models of emerging infectious diseases. STEM uses mathematical models of diseases (based on differential equations) to simulate the development or evolution of a disease in space and time (e.g., avian flu or salmonella). These models could aid in understanding, and potentially preventing, the spread of such diseases. STEM also comes pre-configured with a vast amount of reference or denominator data for the entire world. By using and extending the data and models in STEM it is possible to rapidly prototype and test models for emerging infectious disease. STEM also provides tools to help you compare and validate your models. As an open source project, the ultimate goal of STEM is to support and encourage a community of scientists who not only use STEM as a tool but also contribute back to it. STEM is designed so that models and scenarios can be easily shared, extended, and built upon. |
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+ | {| style="width: 90%" border="1" cellpadding="5" cellspacing="0" align="center" | ||
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− | ! style="background: #cceeff;" | | + | ! style="width: 45%; background: #cceeff;" | |
=== Introductory Resources === | === Introductory Resources === | ||
− | ! colspan="2" style="background: #cceeff;" | | + | ! colspan="2" style="width: 45%; background: #cceeff;" | |
=== Tutorials === | === Tutorials === | ||
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<!-- upper left (INTRODUCTORY RESOURCES GO HERE) --> | <!-- upper left (INTRODUCTORY RESOURCES GO HERE) --> | ||
+ | *[[Installation Guide]] | ||
*[http://www.eclipse.org/stem/ The STEM Website] | *[http://www.eclipse.org/stem/ The STEM Website] | ||
*[[About STEM]] | *[[About STEM]] | ||
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#Full length video [http://www.youtube.com/watch?v=3S5DbjCHsx4 In Spanish] | #Full length video [http://www.youtube.com/watch?v=3S5DbjCHsx4 In Spanish] | ||
#[http://www.youtube.com/watch?v=OoiFLemepw4 5 min Video (English)] | #[http://www.youtube.com/watch?v=OoiFLemepw4 5 min Video (English)] | ||
+ | #Avian Influenza | ||
+ | ##Only [https://youtu.be/tI0Ogy-8O10 Poultry-Human Transmission] | ||
+ | ##Including [https://youtu.be/0YJ6FxdhFm8 Human-Human Transmission] | ||
*[http://www.eclipse.org/stem/talksOnline.php Scientific Talks Online] | *[http://www.eclipse.org/stem/talksOnline.php Scientific Talks Online] | ||
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*[[Creating a Customized Color Provider|Customizing Colors]] | *[[Creating a Customized Color Provider|Customizing Colors]] | ||
*[[STEM Performance Tips |General tips when writing performance critical code]] | *[[STEM Performance Tips |General tips when writing performance critical code]] | ||
− | + | *Working with Graphs | |
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#[[Composing a Graph]] | #[[Composing a Graph]] | ||
#[[Creating a new Graph|Creating a Custom Graph]] (''new'') ''seasonal migration'' | #[[Creating a new Graph|Creating a Custom Graph]] (''new'') ''seasonal migration'' | ||
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#[[Importing a Pajek Graph|Importing a Graph from a Pajek File]] | #[[Importing a Pajek Graph|Importing a Graph from a Pajek File]] | ||
#[[Importing an Esri Shapefile|Importing a Graph from an Esri Shapefile]] | #[[Importing an Esri Shapefile|Importing a Graph from an Esri Shapefile]] | ||
− | + | *[[STEM_Solvers|Available STEM Solvers]] | |
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**STEM Native Solvers | **STEM Native Solvers | ||
**Apache Common Math Solvers | **Apache Common Math Solvers | ||
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*[[Transportation Models|Transportation Models]] | *[[Transportation Models|Transportation Models]] | ||
*[[Air Travel Model|Air Travel Model]] | *[[Air Travel Model|Air Travel Model]] | ||
+ | *'''Modeling New Diseases''' | ||
+ | #[[STEM Model Creator|Using the '''''New!!''''' STEM Model Creator tool]] (''beta'') | ||
+ | #[[STEM Model Generator]] tool (for Developers) | ||
+ | #[[STEM_Model_Generator/Install|Model Generator Installation]] | ||
+ | #[[Creating a new Disease Model Plug-in|Manual Model Plug-in generation]] | ||
+ | #[[Creating a new disease label|Manual Disease Label creation]] | ||
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! style="background: #ffdead;" | | ! style="background: #ffdead;" | | ||
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<!-- bottom left (RELEASE PLANNING GOES HERE) --> | <!-- bottom left (RELEASE PLANNING GOES HERE) --> | ||
''Please also see our [http://www.eclipse.org/stem website]'' and [[Whats New in STEM|What's New in STEM]] | ''Please also see our [http://www.eclipse.org/stem website]'' and [[Whats New in STEM|What's New in STEM]] | ||
+ | * V3.0.0 Milestone 1 is now Available | ||
+ | * Based on and compatible with Eclipse 4.5.1 (Mars) | ||
+ | * STEM V3.0.0M1 supports (J2SE) 8.0 JVM. ''In fact - it's required'' | ||
− | + | * V2.0.3 Now Available (Feb. 2015) | |
+ | ** Bug Fixes | ||
+ | ** Updated Admin 0 borders added | ||
+ | ** New models | ||
+ | ** Updated Google Earth(tm) Interface | ||
− | + | * Release Engineering | |
− | * | + | ** STEM releases are created by the team of STEM committers and uploaded to Eclipse on a regular basis. |
− | * | + | ** Documentation for the process may be found on the [[STEM Releng]] page. |
− | * | + | | |
+ | <!-- bottom right (DISCLAIMER GOES HERE) --> | ||
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<br> | <br> | ||
Click on the header for this section to view the [[Disclaimer]]. | Click on the header for this section to view the [[Disclaimer]]. |
Revision as of 12:25, 21 October 2015
STEM Community Phone Call
The STEM community runs a monthly phone call anyone is free to join. The special series of Community Ebola Modeling Phone Calls has been merged back with our regular monthly phone call. You can still see all the Ebola content here
STEM Documentation
The Spatio-Temporal Epidemiological Modeler (STEM) is a tool designed to help scientists and public health officials create and use models of emerging infectious diseases. STEM uses mathematical models of diseases (based on differential equations) to simulate the development or evolution of a disease in space and time (e.g., avian flu or salmonella). These models could aid in understanding, and potentially preventing, the spread of such diseases. STEM also comes pre-configured with a vast amount of reference or denominator data for the entire world. By using and extending the data and models in STEM it is possible to rapidly prototype and test models for emerging infectious disease. STEM also provides tools to help you compare and validate your models. As an open source project, the ultimate goal of STEM is to support and encourage a community of scientists who not only use STEM as a tool but also contribute back to it. STEM is designed so that models and scenarios can be easily shared, extended, and built upon.