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| − | == Resource Manager PBS XML (Example) ==
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| − | '''''Current version (05/19/2011):''''' -alr
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| − | <source lang="xml">
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| − | <?xml version="1.0" encoding="UTF-8"?>
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| − | <!-- ******************************************************************************* -->
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| − | <!-- * Copyright (c) 2011 University of Illinois All rights reserved. This program -->
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| − | <!-- * and the accompanying materials are made available under the terms of the -->
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| − | <!-- * Eclipse Public License v1.0 which accompanies this distribution, and is -->
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| − | <!-- * available at http://www.eclipse.org/legal/epl-v10.html -->
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| − | <!-- * -->
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| − | <!-- * Contributors: -->
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| − | <!-- * Albert L. Rossi - design and implementation -->
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| − | <!-- ****************************************************************************** -->
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| − | <resource-manager-builder xmlns="http://org.eclipse.ptp/rm" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
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| − | xsi:schemaLocation="resource_manager_type.xsd" name="pbs-torque-generic">
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| − | <control-data>
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| − | <property name="queues" visible="false"/>
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| − | <!-- needed by RM internals for fetch; name is fixed by convention -->
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| − | <property name="stdout_remote_path" visible="false"/>
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| − | <!-- needed by RM internals for fetch; name is fixed by convention -->
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| − | <property name="stderr_remote_path" visible="false"/>
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| − | <property name="remote_path_tooltip" visible="false">
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| − | <default><![CDATA[Not the same as the PBS attribute for stdout or stderr;
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| − | used internally by the resource manager and should correspond
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| − | to whatever path the scheduler will copy the output to at the
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| − | end of execution; the job id can be included in this path
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| − | using '@jobId'.]]></default>
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| − | </property>
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| − | <attribute name="mpiCommand" type="choice">
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| − | <description>Which mpi command to use.</description>
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| − | <choice>,mpiexec,mpirun</choice>
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| − | </attribute>
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| − | <attribute name="mpiCores" min="1" type="integer">
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| − | <description>the '-np' value</description>
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| − | </attribute>
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| − | <attribute name="Account_Name" type="string">
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| − | <description>Account to which to charge this job.</description>
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| − | <tooltip>Format: string</tooltip>
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| − | </attribute>
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| − | <attribute name="Checkpoint" type="choice">
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| − | <description>Determines when checkpointing (if supported) will be performed by PBS on behalf of the job.</description>
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| − | <tooltip><![CDATA[Format: the strings "n" (no checkpointing),
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| − | "s" (to be performed only when the server executing
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| − | the job is shutdown), "c"s (to be performed at the
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| − | default minimum time for thes servers executing the
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| − | job), "c=mmmm" (to be performed at an intervals
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| − | of minutes which is the integer number of minutes of CPUs
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| − | time used bys the job; values must be greater than zero);
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| − | defaults value: "u", which is unspecified.]]></tooltip>
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| − | <choice>,u,n,s,c,c=????</choice>
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| − | <default>u</default>
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| − | </attribute>
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| − | <attribute name="depend" type="string">
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| − | <description>The type of inter-job dependencies specified by the job owner.</description>
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| − | <tooltip>Format: "type:jobid[,jobid...]"; default value: no dependencies.</tooltip>
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| − | </attribute>
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| − | <attribute name="destination" type="choice">
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| − | <description>Designation of the queue to which to submit the job.</description>
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| − | <tooltip>Format: queue[@server].</tooltip>
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| − | <choice>normal,debug</choice>
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| − | </attribute>
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| − | <attribute name="directive" type="string">
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| − | <description>Defines the prefix that declares a directive to the qsub command within the script file.</description>
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| − | <tooltip><![CDATA[See the paragraph on script directives in the
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| − | Extended Description section. If the option is presented with a
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| − | directive_prefix argument that is the null string, qsub will
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| − | not scan the script file for directives.]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Error_Path" type="string">
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| − | <description>The final path name for the file containing the job's standard error stream.</description>
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| − | <tooltip><![CDATA[Format: "[hostname:]pathname". If
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| − | the option is not specified, the default file name for the
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| − | standard error stream will be used. The default name has
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| − | the following form: job_name.eSeq_num where job_name is
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| − | the name of the job, see -N option, and Seq_num
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| − | is the job number assigned when the job is submitted;
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| − | default value: (job_name).e(job_number).]]></tooltip>
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| − | </attribute>
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| − | <attribute name="export_all" type="boolean">
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| − | <description><![CDATA[Declares that all environment variables in the qsub command's environment are to be exported to the batch job.]]></description>
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| − | <default>true</default>
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| − | </attribute>
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| − | <attribute name="group_list" type="string">
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| − | <description><![CDATA[A list of composite-descriptor group="true"_names@hosts which determines the composite-descriptor group="true" under which the job is run on a given host.]]></description>
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| − | <tooltip><![CDATA[Format: composite-descriptor
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| − | group="true"_name[@host][,composite-descriptor group="true"_name[@host]...].
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| − | When a job is to be placed into execution, the server will select a
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| − | composite-descriptor group="true" name according to the following ordered set
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| − | of rules: 1) Select the composite-descriptor group="true" name from
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| − | the list for which the associated host name matches the name of the
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| − | execution host; 2) Select the composite-descriptor group="true" name
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| − | which has no associated host name, the wildcard name; 3) Use
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| − | the login composite-descriptor group="true" for the username under
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| − | which the job will be run.]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Hold_Types" type="choice">
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| − | <description>The set of holds currently applied to the job.</description>
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| − | <tooltip><![CDATA[If the set is not null, the job will not be scheduled
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| − | for execution and is said to be in the hold state. Note, the hold
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| − | state takes precedence over the wait state. Format: string made up
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| − | of the letters 'u', 's', 'o'; default value: no hold.]]></tooltip>
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| − | <choice>,u,s,o</choice>
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| − | </attribute>
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| − | <attribute name="Job_Name" type="string">
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| − | <description>The name assigned to the job by the qsub or qalter command.</description>
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| − | <tooltip><![CDATA[Format: string up to 15 characters,
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| − | first character must be alphabetic; default value:
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| − | the base name of the job script or STDIN.]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Join_Path" type="boolean">
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| − | <description>Merge stdout and stderr into stdout.</description>
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| − | <tooltip><![CDATA[Format: boolean, values accepted are "True", "TRUE",
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| − | "true", "Y", "y", "1", "False", "FALSE", "false", "N", "n", "0";
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| − | default value: false.]]></tooltip>
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| − | <default>false</default>
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| − | </attribute>
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| − | <attribute name="Keep_Files" type="choice">
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| − | <description>Retain these streams on the execution host upon job termination.</description>
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| − | <tooltip><![CDATA[Format: "o", "e", "oe" or "eo"; default value:
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| − | no keep, return files to submission host.]]></tooltip>
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| − | <choice>,o,e,oe,eo</choice>
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| − | </attribute>
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| − | <attribute name="Mail_Points" type="choice">
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| − | <description>Identifies at which state changes the server will send mail about the job.</description>
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| − | <tooltip><![CDATA[Format: string made up of the letters
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| − | 'a' for abort, 'b' for beginning, and default value:
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| − | a', send on job abort.]]></tooltip>
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| − | <choice>,a,b</choice>
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| − | <default>a</default>
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| − | </attribute>
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| − | <attribute name="Mail_Users" type="string">
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| − | <description>The set of users to whom mail may be sent when the job makes certain state changes.</description>
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| − | <tooltip>Format: "user@host[,user@host]"; default value: job owner only.</tooltip>
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| − | </attribute>
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| − | <attribute name="Output_Path" type="string">
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| − | <description>The final path name for the file containing the job's standard output stream.</description>
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| − | <tooltip><![CDATA[Format: "[hostname:]pathname". If the option
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| − | is not specified, the default file name for the standard error stream
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| − | will be used. The default name has the following form: job_name.oSeq_num
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| − | where job_name is the name of the job, see -N option, and Seq_num
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| − | is the job number assigned when the job is submitted;
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| − | default value: (job_name).o(job_number).]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Priority" type="string">
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| − | <description>The job scheduling priority assigned by the user.</description>
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| − | <tooltip>Format: "[+|-]nnnnn"; default value: undefined.</tooltip>
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| − | </attribute>
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| − | <attribute name="Rerunnable" type="choice">
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| − | <description>The rerunnable flag assigned by the user.</description>
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| − | <tooltip>Format: "y" or "n", see Join_Path; default value: y, job is rerunable.</tooltip>
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| − | <choice>,n,y</choice>
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| − | <default>y</default>
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| − | </attribute>
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| − | <attribute name="Resource_List.arch" type="string">
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| − | <description>Specifies the administrator defined system architecture requried.</description>
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| − | <tooltip>This defaults to whatever the PBS_MACH string is set to in "local.mk". Units: string.</tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.cput" type="string">
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| − | <description>Maximum amount of CPU time used by all processes in the job.</description>
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| − | <tooltip>Format: [[hours:]minutes:]seconds[.milliseconds].</tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.file" type="string">
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| − | <description>The largest size of any single file that may be created by the job.</description>
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| − | <tooltip><![CDATA[Format: integer[suffix]; the suffix is a multiplier
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| − | in bytes or words (word size of the host): b (bytes),
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| − | w (words), kb/kw (kilo), mb/mw (mega), gb/bw (giga).]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.host" type="string">
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| − | <description>Name of host on which job should be run.</description>
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| − | </attribute>
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| − | <attribute name="Resource_List.mem" type="string">
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| − | <description>Maximum amount of memory used by all concurrent processes in the job.</description>
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| − | <tooltip><![CDATA[Format: integer[suffix]; the suffix is a multiplier
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| − | in bytes or words (word size of the host): b (bytes),
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| − | w (words), kb/kw (kilo), mb/mw (mega), gb/bw (giga).]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.nice" type="integer" min="0" max="10">
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| − | <description>The nice value under which the job is to be run.</description>
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| − | <tooltip>0 to 10.</tooltip>
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| − | <default>0</default>
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| − | </attribute>
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| − | <attribute name="Resource_List.nodes" type="string">
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| − | <description>Number and/or type of nodes to be reserved for exclusive use by the job.</description>
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| − | <tooltip><![CDATA[The value is one or more node_specs joined with
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| − | the '+' character, "node_spec[+node_spec...]. Each node_spec is
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| − | a number of nodes required of the type declared in the node_spec
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| − | and a name or one or more properity or properities desired for
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| − | the nodes. The number, the name, and each properity in the
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| − | node_spec are separated by a colon ':'. If no number is specified,
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| − | one (1) is assumed. Units: string. The name of a node is its
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| − | hostname. The properties of nodes are: ppn=# requested; defaults
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| − | to 1; or an arbitrary string defined by system administrator.
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| − | Example: To ask for 2 processors on each of two blue nodes and
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| − | three processors on one red node: -l nodes=2:blue:ppn=2+red:ppn=3.]]></tooltip>
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| − | <default>1</default>
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| − | </attribute>
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| − | <attribute name="Resource_List.ompthreads" type="integer" min="1">
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| − | <description>Number of threads per processor for Open MP jobs.</description>
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| − | <default>1</default>
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| − | </attribute>
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| − | <attribute name="Resource_List.pcput" type="string">
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| − | <description>Maximum amount of CPU time used by any single process in the job.</description>
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| − | <tooltip>Format: [[hours:]minutes:]seconds[.milliseconds].</tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.pmem" type="string">
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| − | <description>Maximum amount of physical memory (workingset) used by any single process of the job.</description>
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| − | <tooltip><![CDATA[Format: integer[suffix]; the suffix is a multiplier
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| − | in bytes or words (word size of the host): b (bytes), w (words), kb/kw
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| − | (kilo), mb/mw (mega), gb/bw (giga).]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.pvmem" type="string">
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| − | <description>Maximum amount of virtual memory used by any single process in the job.</description>
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| − | <tooltip><![CDATA[Format: integer[suffix]; the suffix is a multiplier
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| − | in bytes or words (word size of the host): b (bytes), w (words), kb/kw
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| − | (kilo), mb/mw (mega), gb/bw (giga).]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.vmem" type="string">
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| − | <description>Maximum amount of virtual memory used by all concurrent processes in the job.</description>
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| − | <tooltip><![CDATA[Format: integer[suffix]; the suffix is a multiplier
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| − | in bytes or words (word size of the host): b (bytes), w (words), kb/kw
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| − | (kilo), mb/mw (mega), gb/bw (giga).]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Resource_List.walltime" type="string">
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| − | <description>Maximum amount of real time during which the job can be in the running state.</description>
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| − | <tooltip>Format: [[hours:]minutes:]seconds[.milliseconds].</tooltip>
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| − | <default>00:30:00</default>
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| − | </attribute>
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| − | <attribute name="Shell_Path_List" type="string">
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| − | <description>A set of absolute paths of the program to process the job's script file.</description>
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| − | <tooltip><![CDATA[Format: path[@host][,path[@host]...].
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| − | If this is null, then the user's login shell on the host
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| − | of execution will be used. Default value: null, login shell.]]></tooltip>
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| − | </attribute>
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| − | <attribute name="stagein" type="string">
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| − | <description>The list of files to be staged in prior to job execution.</description>
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| − | <tooltip>Format: local_path@remote_host:remote_path.</tooltip>
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| − | </attribute>
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| − | <attribute name="stageout" type="string">
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| − | <description>The list of files to be staged out after job execution.</description>
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| − | <tooltip>Format: local_path@remote_host:remote_path.</tooltip>
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| − | </attribute>
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| − | <attribute name="User_List" type="string">
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| − | <description>The list of user@hosts which determines the user name under which the job is run on a given host.</description>
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| − | <tooltip><![CDATA[When a job is to be placed into execution,
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| − | the server will select a user name from the list according
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| − | to the following ordered set of rules: 1) Select the user
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| − | name from the list for which the associated host name matches
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| − | the name of the execution host; 2) Select the user name which
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| − | has no associated host name, the wild card name; 3) Use the
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| − | Job_Owner as the user name. Default value: job owner name.]]></tooltip>
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| − | </attribute>
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| − | <attribute name="Variable_List" type="string">
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| − | <description>This is the list of environment variables passed with the Queue Job batch request.</description>
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| − | </attribute>
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| − | <script insertEnvironmentAfter="35">
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| − | <line>
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| − | <arg>#!/bin/bash</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -A">#PBS -A ${ptp_rm:Account_Name#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -c">#PBS -c ${ptp_rm:Checkpoint#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -W depend=">#PBS -W depend=${ptp_rm:depend#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -q">#PBS -q ${ptp_rm:destination#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -C">#PBS -C ${ptp_rm:line#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -e">#PBS -e ${ptp_rm:Error_Path#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -V">#PBS -V ${ptp_rm:export_all#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -W group_list=">#PBS -W group_list=${ptp_rm:group_list#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -h">#PBS -h ${ptp_rm:Hold_Types#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -N">#PBS -N ${ptp_rm:Job_Name#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -j">#PBS -j ${ptp_rm:Join_Path#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -k">#PBS -k ${ptp_rm:Keep_Files#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -m">#PBS -m ${ptp_rm:Mail_Points#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -M">#PBS -M ${ptp_rm:Mail_Users#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -o">#PBS -o ${ptp_rm:Output_Path#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -p">#PBS -p ${ptp_rm:Priority#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -r">#PBS -r ${ptp_rm:Rerunnable#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l arch=">#PBS -l arch=${ptp_rm:Resource_List.arch#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l cput=">#PBS -l cput=${ptp_rm:Resource_List.cput#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l file=">#PBS -l file=${ptp_rm:Resource_List.file#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l host=">#PBS -l host=${ptp_rm:Resource_List.host#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l mem=">#PBS -l mem=${ptp_rm:Resource_List.mem#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l nice=">#PBS -l nice=${ptp_rm:Resource_List.nice#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l nodes=">#PBS -l nodes=${ptp_rm:Resource_List.nodes#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l ompthreads=">#PBS -l ompthreads=${ptp_rm:Resource_List.ompthreads#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l pcput=">#PBS -l pcput=${ptp_rm:Resource_List.pcput#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l pmem=">#PBS -l pmem=${ptp_rm:Resource_List.pmem#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l pvmem=">#PBS -l pvmem=${ptp_rm:Resource_List.pvmem#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l vmem=">#PBS -l vmem=${ptp_rm:Resource_List.vmem#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -l walltime=">#PBS -l walltime=${ptp_rm:Resource_List.walltime#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -S">#PBS -S ${ptp_rm:Shell_Path_List#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -W stagein=">#PBS -W stagein=${ptp_rm:stagein#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -W stageout=">#PBS -W stageout=${ptp_rm:stageout#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -u">#PBS -u ${ptp_rm:User_List#value}</arg>
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| − | </line>
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| − | <line>
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| − | <arg isUndefinedIfMatches="#PBS -v">#PBS -v ${ptp_rm:Variable_List#value}</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg>MPI_ARGS="-np ${ptp_rm:mpiCores#value}"</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false">if [ "-np" == "${MPI_ARGS}" ] ; then</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false"> MPI_ARGS=</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false">fi</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg>COMMAND=${ptp_rm:mpiCommand#value}</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false">if [ -n "${COMMAND}" ] ; then</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false"> COMMAND="${COMMAND} ${MPI_ARGS}</arg>
| |
| − | <arg>${ptp_rm:executablePath#value} ${ptp_rm:progArgs#value}"</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false">else</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg> COMMAND="${ptp_rm:executablePath#value} ${ptp_rm:progArgs#value}"</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false">fi</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg isUndefinedIfMatches="cd">cd ${ptp_rm:directory#value}</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false">${COMMAND}</arg>
| |
| − | </line>
| |
| − | <line>
| |
| − | <arg resolve="false">touch DONE</arg>
| |
| − | </line>
| |
| − | </script>
| |
| − | <start-up-command name="get-queues">
| |
| − | <arg>qstat</arg>
| |
| − | <arg>-Q</arg>
| |
| − | <arg>-f</arg>
| |
| − | <stdout-parser delim="\n">
| |
| − | <target ref="queues">
| |
| − | <match>
| |
| − | <expression>Queue: ([\w\d]+)</expression>
| |
| − | <add field="value">
| |
| − | <entry valueGroup="1"/>
| |
| − | </add>
| |
| − | </match>
| |
| − | </target>
| |
| − | </stdout-parser>
| |
| − | </start-up-command>
| |
| − | <submit-batch name="submit-batch" waitForId="true">
| |
| − | <arg>qsub</arg>
| |
| − | <arg>${ptp_rm:managed_file_for_script#value}</arg>
| |
| − | <stdout-parser delim="\n" all="true" save="1">
| |
| − | <target ref="@jobId">
| |
| − | <match>
| |
| − | <expression>([\d]+)[.].*</expression>
| |
| − | <set field="name">
| |
| − | <entry valueGroup="1"/>
| |
| − | </set>
| |
| − | <set field="value">
| |
| − | <entry value="SUBMITTED"/>
| |
| − | </set>
| |
| − | </match>
| |
| − | </target>
| |
| − | </stdout-parser>
| |
| − | <stderr-parser delim="\n">
| |
| − | <target ref="@jobId">
| |
| − | <match>
| |
| − | <expression>.*Job not submitted.*</expression>
| |
| − | <throw message="Job Submit Failed"/>
| |
| − | </match>
| |
| − | </target>
| |
| − | </stderr-parser>
| |
| − | </submit-batch>
| |
| − | <get-job-status name="get-job-status" ignoreExitStatus="true">
| |
| − | <arg>qstat</arg>
| |
| − | <arg>${ptp_rm:@jobId#name}</arg>
| |
| − | <stdout-parser delim="\n">
| |
| − | <target ref="@jobId">
| |
| − | <match>
| |
| − | <expression>.+[\s]+.+[\s]+.+[\s]+.+[\s]+([A-Z])[\s]+.+</expression>
| |
| − | <set field="value">
| |
| − | <entry valueGroup="1"/>
| |
| − | </set>
| |
| − | </match>
| |
| − | <test op="EQ">
| |
| − | <value>#value</value>
| |
| − | <value>Q</value>
| |
| − | <set field="value">
| |
| − | <entry value="QUEUED_ACTIVE"/>
| |
| − | </set>
| |
| − | </test>
| |
| − | <test op="EQ">
| |
| − | <value>#value</value>
| |
| − | <value>R</value>
| |
| − | <set field="value">
| |
| − | <entry value="RUNNING"/>
| |
| − | </set>
| |
| − | </test>
| |
| − | <test op="EQ">
| |
| − | <value>#value</value>
| |
| − | <value>S</value>
| |
| − | <set field="value">
| |
| − | <entry value="SUSPENDED"/>
| |
| − | </set>
| |
| − | </test>
| |
| − | <test op="EQ">
| |
| − | <value>#value</value>
| |
| − | <value>C</value>
| |
| − | <set field="value">
| |
| − | <entry value="COMPLETED"/>
| |
| − | </set>
| |
| − | </test>
| |
| − | <test op="EQ">
| |
| − | <value>#value</value>
| |
| − | <value>E</value>
| |
| − | <set field="value">
| |
| − | <entry value="COMPLETED"/>
| |
| − | </set>
| |
| − | </test>
| |
| − | <test op="EQ">
| |
| − | <value>#value</value>
| |
| − | <value>H</value>
| |
| − | <set field="value">
| |
| − | <entry value="SYSTEM_ON_HOLD"/>
| |
| − | </set>
| |
| − | </test>
| |
| − | </target>
| |
| − | </stdout-parser>
| |
| − | <stderr-parser delim="\n">
| |
| − | <target ref="@jobId">
| |
| − | <match>
| |
| − | <expression>.+</expression>
| |
| − | <set field="value">
| |
| − | <entry value="COMPLETED"/>
| |
| − | </set>
| |
| − | </match>
| |
| − | </target>
| |
| − | </stderr-parser>
| |
| − | </get-job-status>
| |
| − | <terminate-job name="cancel" ignoreExitStatus="true">
| |
| − | <arg>qdel</arg>
| |
| − | <arg>${ptp_rm:@jobId#name}</arg>
| |
| − | </terminate-job>
| |
| − | <launch-tab>
| |
| − | <dynamic>
| |
| − | <title>Basic PBS Settings</title>
| |
| − | <!-- ATTRIBUTES group -->
| |
| − | <composite group="true">
| |
| − | <layout>
| |
| − | <grid-layout numColumns="4" makeColumnsEqualWidth="false" horizontalSpacing="10" verticalSpacing="15"/>
| |
| − | </layout>
| |
| − | <!-- HEADER -->
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_RED">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>Name</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_RED">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" horizontalSpan="2" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>Value</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_RED">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>Description</fixed-text>
| |
| − | </widget>
| |
| − | <!-- row 1 -->
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <tooltip>${ptp_rm:Job_Name#tooltip}</tooltip>
| |
| − | <fixed-text>Job Name: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="Job_Name">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="false" widthHint="150"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>${ptp_rm:Job_Name#description}</fixed-text>
| |
| − | </widget>
| |
| − | <!-- row 2 -->
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <tooltip>${ptp_rm:destination#tooltip}</tooltip>
| |
| − | <fixed-text>Queue: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="combo" style="SWT.BORDER" readOnly="true" saveValueTo="destination">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <items-from>queues</items-from>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>${ptp_rm:destination#description}</fixed-text>
| |
| − | </widget>
| |
| − | <!-- row 3 -->
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <tooltip>${ptp_rm:Resource_List.nodes#tooltip}</tooltip>
| |
| − | <fixed-text>Number of nodes: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="Resource_List.nodes">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="false" widthHint="150"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>${ptp_rm:Resource_List.nodes#description}</fixed-text>
| |
| − | </widget>
| |
| − | <!-- row 4 -->
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <tooltip>${ptp_rm:Resource_List.mem#tooltip}</tooltip>
| |
| − | <fixed-text>Total Memory Needed: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="Resource_List.mem">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="false" widthHint="150"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>${ptp_rm:Resource_List.mem#description}</fixed-text>
| |
| − | </widget>
| |
| − | <!-- row 5 -->
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <tooltip>${ptp_rm:Resource_List.walltime#tooltip}</tooltip>
| |
| − | <fixed-text>Wallclock Time: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="Resource_List.walltime">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="false" widthHint="150"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>${ptp_rm:Resource_List.walltime#description}</fixed-text>
| |
| − | </widget>
| |
| − | <!-- row 6 -->
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>MPI Command: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="combo" style="SWT.BORDER" readOnly="true" saveValueTo="mpiCommand">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>${ptp_rm:mpiCommand#description}</fixed-text>
| |
| − | </widget>
| |
| − | <!-- row 7 -->
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>MPI Number of Cores: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="spinner" readOnly="true" saveValueTo="mpiCores">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" horizontalSpan="2" grabExcessHorizontal="false" widthHint="100"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING" grabExcessHorizontal="false"/>
| |
| − | </layout-data>
| |
| − | <fixed-text>${ptp_rm:mpiCores#description}</fixed-text>
| |
| − | </widget>
| |
| − | </composite>
| |
| − | <!-- STDOUT/STDERR remote path group -->
| |
| − | <composite group="true">
| |
| − | <layout>
| |
| − | <grid-layout numColumns="4" makeColumnsEqualWidth="false"/>
| |
| − | </layout>
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" grabExcessHorizontal="false" horizontalSpan="4" widthHint="300"/>
| |
| − | </layout-data>
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <tooltip>${ptp_rm:remote_path_tooltip#default}</tooltip>
| |
| − | <fixed-text>Remote Output Path:</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="stdout_remote_path">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="true" widthHint="100"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <fixed-text>Enable read upon job termination</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <tooltip>${ptp_rm:remote_path_tooltip#default}</tooltip>
| |
| − | <fixed-text>Remote Error Path:</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="stderr_remote_path">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="true" widthHint="100"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <fixed-text>Enable read upon job termination</fixed-text>
| |
| − | </widget>
| |
| − | </composite>
| |
| − | </dynamic>
| |
| − | <dynamic>
| |
| − | <title>Advanced PBS Settings</title>
| |
| − | <composite>
| |
| − | <layout>
| |
| − | <grid-layout numColumns="1"/>
| |
| − | </layout>
| |
| − | <layout-data>
| |
| − | <grid-data widthHint="600" heightHint="900" horizontalSpan="1"/>
| |
| − | </layout-data>
| |
| − | <!-- QUEUES remote path group -->
| |
| − | <composite group="true">
| |
| − | <layout>
| |
| − | <grid-layout numColumns="3" makeColumnsEqualWidth="false"/>
| |
| − | </layout>
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.BEGINNING"/>
| |
| − | </layout-data>
| |
| − | <tooltip>${ptp_rm:destination#tooltip}</tooltip>
| |
| − | <fixed-text>Queue: </fixed-text>
| |
| − | </widget>
| |
| − | <widget type="combo" style="SWT.BORDER" readOnly="true" saveValueTo="destination">
| |
| − | <layout-data>
| |
| − | <grid-data widthHint="150" horizontalAlign="SWT.FILL" horizontalSpan="2"/>
| |
| − | </layout-data>
| |
| − | <items-from>queues</items-from>
| |
| − | </widget>
| |
| − | </composite>
| |
| − | <composite group="true">
| |
| − | <layout>
| |
| − | <grid-layout numColumns="1"/>
| |
| − | </layout>
| |
| − | <widget type="text" readOnly="true" style="SWT.LEFT | SWT.BORDER | SWT.WRAP | SWT.V_SCROLL">
| |
| − | <layout-data>
| |
| − | <grid-data widthHint="600" heightHint="75" horizontalSpan="1"/>
| |
| − | </layout-data>
| |
| − | <dynamic-text>
| |
| − | <arg>${ptp_rm:allAttributes#value}</arg>
| |
| − | <arg isUndefinedIfMatches=" destination=''"> destination='${ptp_rm:destination#value}'</arg>
| |
| − | </dynamic-text>
| |
| − | </widget>
| |
| − | <viewer name="allAttributes" style="SWT.BORDER | SWT.MULTI" sort="true" type="tree">
| |
| − | <layout-data>
| |
| − | <grid-data widthHint="600" heightHint="400" horizontalSpan="1"/>
| |
| − | </layout-data>
| |
| − | <column-data name="Name" width="175">
| |
| − | <tooltip>Double-click on selected rows toggles their checked value.</tooltip>
| |
| − | </column-data>
| |
| − | <column-data name="Value" width="400">
| |
| − | <tooltip>Click to activate value widget.</tooltip>
| |
| − | </column-data>
| |
| − | <items allPredefined="true">
| |
| − | <exclude>destination</exclude>
| |
| − | </items>
| |
| − | <value pattern="@name='@value'"/>
| |
| − | </viewer>
| |
| − | </composite>
| |
| − | <!-- STDOUT/STDERR remote path group -->
| |
| − | <composite group="true">
| |
| − | <layout>
| |
| − | <grid-layout numColumns="4" makeColumnsEqualWidth="false"/>
| |
| − | </layout>
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" grabExcessHorizontal="false" horizontalSpan="4" widthHint="400"/>
| |
| − | </layout-data>
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <tooltip>${ptp_rm:remote_path_tooltip#default}</tooltip>
| |
| − | <fixed-text>Remote Output Path:</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="stdout_remote_path">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="true" widthHint="175"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <fixed-text>Enable read upon job termination</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT">
| |
| − | <tooltip>${ptp_rm:remote_path_tooltip#default}</tooltip>
| |
| − | <fixed-text>Remote Error Path:</fixed-text>
| |
| − | </widget>
| |
| − | <widget type="text" style="SWT.BORDER" saveValueTo="stderr_remote_path">
| |
| − | <layout-data>
| |
| − | <grid-data horizontalAlign="SWT.FILL" horizontalSpan="2" grabExcessHorizontal="true" widthHint="175"/>
| |
| − | </layout-data>
| |
| − | </widget>
| |
| − | <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE">
| |
| − | <fixed-text>Enable read upon job termination</fixed-text>
| |
| − | </widget>
| |
| − | </composite>
| |
| − | </composite>
| |
| − | </dynamic>
| |
| − | <import>Import PBS Script</import>
| |
| − | </launch-tab>
| |
| − | </control-data>
| |
| − | <monitor-data schedulerType="PBS">
| |
| − | <driver>
| |
| − | <name></name>
| |
| − | </driver>
| |
| − | </monitor-data>
| |
| − | </resource-manager-builder>
| |
| − | </source>
| |
